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Bierregaard, R. O. Jr., Stotz, D. F., Harper, L. H., & Powell, G. V. N. (1987). Observations on the occurrence and behavior of the Crimson Fruit Crow (Haematoderis militaris), in central Amazonia. Bull. Brit. Ornith. Club., 107, 134–137.
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Bierregaard Jr., R. O., & Lovejoy, T. E. (1988). Birds in Amazonian forest fragments: Effects of insularization. Acta XIX, 2, 1564–1579.
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Klein, B. C., & Bierregaard, R. O. (1988). Movement and calling behavior of the Lined Forest-falcon (Micrastur gilvicollis) in the Brazilian Amazon. The Condor, 90(2), 497–499.
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Bierregaard, R. O. Jr., & Lovejoy, T. E. (1989). Effects of forest fragmentation on Amazonian understory bird communities. Acta Amazonica, 19, 215–241.
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Harper, L. H. (1989). The persistence of ant-following birds in small Amazonian forest fragments. Acta Amazonica, 19, 249–263.
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Powell, G. V. N. (1989). On the possible contribution of mixed species flocks to species richness in Neotropical avifaunas. Behav. Ecology Sociobiology, 24, 387–393.
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Stotz, D. F., & Bierregaard Jr., R. O. (1989). The birds of the fazendas Porto Alegre, Dimona and Esteio north of Manaus, Amazonas, Brazil. Revista Brasileira de Biologia, 49(3), 861–872.
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Bierregaard Jr., R. O. (1990). Avian communities in the understory of Amazonian forest fragments. In Biogeography and Ecology of Forest Bird Communities (pp. 333–343). SPB Academic Publishing.
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Bierregaard Jr., R. O. (1990). Species composition and trophic organization of the understory bird community in a Central Amazonian terra firme forest. In Four Neotropical Rainforests (pp. 217–236). Yale Univ. Press.
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Karr, J. R., Blake, J., Robinson, S., & Bierregaard Jr., R. O. (1990). Birds of four Neotropical. In Four Neotropical Rainforests (pp. 237–269). Yale Univ. Press.
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Stotz, D. F., Bierregaard Jr., R. O., Cohn-Haft, M., Peterman, P., Smith, J., Whittaker, A., & Wilson, S. V. (1992). The status of North American migrants in the central Amazonian Brazil. The Condor, 94(3), 608–621.
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Stouffer, P. C., & Bierregaard Jr., R. O. (1993). Spatial and temporal abundance patterns of Ruddy Quail-Doves (Geotrygon montana) near Manaus, Brazil. The Condor, 95(4), 896–903.
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Fonseca, F. (1994). Herbivory and long-lived leaves of an Amazonian ant-tree. Journal of Ecology, 82(4), 833–842.
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Borges, S. H. (1995). Ninhos e ovos de Caryothraustes candensis (Passeriformes: Emberizidae). Ararajuba, 3, 76.
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Stouffer, P. C. (1995). Effects of forest fragmentation on understory hummingbirds in Amazonian, Brazil. Conservation Biology, 9(5), 1085–1094.
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Stouffer, P. C., & Bierregaard Jr., R. O. (1995). Use of Amazonian forest fragments by understory insectivorous birds. Ecology, 76(8), 2429–2445.
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Whittaker, A. (1995). Range extensions and nesting of the Glossy-backed Becard Pachyramphus surinamus in central Amazonian Brazil. Bull. British Ornith. Club., 115(1), 45–48.
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Stouffer, P. C., & Bierregaard Jr., R. O. (1996). Forest fragmentation and seasonal patterns of hummingbird abundance in Amazonian Brazil. Ararajuba, 4(1), 9–15.
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Bierregaard Jr., R. O., Cohn-Haft, M., & Stotz, D. F. (1997). Cryptic biodiversity: an overlooked species and new subspeices of antbird (Aves; Formicariidae) with a revision of Cercomacra tyrannina in northeastern South America. Ornithological Monographs, 48, 111–128.
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Cohn-Haft, M., Whittaker, A., & Stouffer, P. C. (1997). A new look at "species-poor’ central Amazon: the avifauna north of Manaus, Brazil. Ornithological Monographs, 48, 205–235.
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